Related to my previous post on MS discontinuing use of MD5 in Vista...
Here's some proof of concept code written in .NET - creates an 'evil' exe with the same MD5 checksome as the 'good' exe:
The Code Project - Exploiting MD5 collisions (in C#) - .NET
9.23.2005
Exploiting MD5 collisions (in C#) - .NET
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